CDS

Accession Number TCMCG057C38053
gbkey CDS
Protein Id XP_018441439.1
Location join(53293132..53293277,53295309..53295372,53295608..53295697,53295797..53295853,53295957..53296005,53296082..53296158,53296251..53296385,53296582..53296749,53297038..53297148,53297238..53297392,53297765..53297840,53297947..53298064,53298155..53298400,53298481..53298620,53298706..53298888,53298998..53299117,53299221..53299268)
Gene LOC108813397
GeneID 108813397
Organism Raphanus sativus

Protein

Length 660aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585937.1
Definition PREDICTED: long chain acyl-CoA synthetase 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description Long-chain-fatty-acid--CoA ligase family protein
KEGG_TC 4.C.1.1
KEGG_Module M00086        [VIEW IN KEGG]
KEGG_Reaction R01280        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00014        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K01897        [VIEW IN KEGG]
EC 6.2.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00061        [VIEW IN KEGG]
ko00071        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
ko03320        [VIEW IN KEGG]
ko04146        [VIEW IN KEGG]
ko04216        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04920        [VIEW IN KEGG]
map00061        [VIEW IN KEGG]
map00071        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03320        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
map04216        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04920        [VIEW IN KEGG]
GOs GO:0001676        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004467        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010025        [VIEW IN EMBL-EBI]
GO:0010143        [VIEW IN EMBL-EBI]
GO:0010166        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015645        [VIEW IN EMBL-EBI]
GO:0016405        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016877        [VIEW IN EMBL-EBI]
GO:0016878        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031957        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901568        [VIEW IN EMBL-EBI]
GO:1901570        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGTCTTTCGCGGCAAAGGTGGAAGATGGAGTTAAAGGGGAAGATGGGAGGCCATCCGTAGGTCCGGTGTACCGTAATCTTTTGTCGGAGAAAGGTTTTCCTCCTCGTCATTCTGATATTACTACTACTTGGGATATTTTCAGTAAATCAGTGGACAAGTTCCCTAATAACAAGATGCTTGGATGGCGTCCAATTGCTGATGAGAAGGTTGGACCGTATATTTGGAAAACTTACAAAGAAGTATACGAAGAAGTTCTGCAGATTGGCTCTGCGCTGCGAGCCGCCGGAGCTGAACCTGGCTGTCGAGTGGGAATCTATGGAGCTAATTGTCCTCAGTGGATCATAGCAATGGAGGCTTGTGCAGCTCACGCCCTAATCTCTGTACCTCTATATGATACATTAGGTGCCGGAGCAGTTGATTATATCGTTAATCACGCGGAAATTGATTTTGTGTTCGTCCAGAATACCAAGATTAAAAGACTGTTTGAGCCGGATTGCACAAGTGCAAACCGACTTAAAGCTGTAGTTTCATTCACAAATGTGAGCGAAGAACACAGCCACAAAGCTTCAGAAATTGGAGTAAAAGCATACTCGTGGCTCGATTTTCTTCTTATGGGACGAGAGAAGCCGGAAGAGACAAACCCGCCTAAACCGTCTAACGTGTGCACCATAATGTACACGAGCGGCACGAGCGGTGAACCTAAAGGTGTGGTTTTGACCCACGAAGCTGCTGCGACTTGCGTTATTGGGATAGATCTCTGCATGGACCAGTTTGAAGACAAGATGACTCCCGACGATGTGTATATCTCGTTCTTGCCGTTGGCCCATATTCTTGACCGTGCGAATGAGGAATATTTCTTTCGAAATGGCGCTTCGGTTGGCTATTACCATGGAGATTTGAATGCATTACACGATGATATTCAAGAACTGAAACCGACTTTTATAGCCGGAGTTCCAAGAGTCTTCGAGAGGATCTATGAAGGGATTCAGAAGGCTCTTCAGGAGCTTAACCCAAGAAGGAGACTCATCTTCTATGCTCTTTATAAATACAAACTTGCGTGGATGAATCGTGGGTACTCTCACAGTAAAGCTTCACCCATGGCTGACTTCTTAGCTTTCAGAAAGATTAGAAAACAGTTAGGAGGTCGACTCCGGTTATTAGTATCTGGTGGAGCACCACTGAGTCCTGAGATCGAAGAGTTCTTGAGAGTTACTTCTTGTTGCTTCGTCATCCAAGGCTATGGTCTAACCGAGACGCTTGGAGGAACAACATTAGGCTATCCGGACGAGATGTGTATGCTGGGGACAGTCGGTATTCCAGCTGTTTACAACGAGATAAGGCTTGAAGAGGTGCCAGAAATGGGCTATGACCCATTGGGTGAAAATCCAGCAGGCGAGATATGTATAAGAGGAAAATGTCTGTTTTCTGGGTATTACAAGAACCCTGAACTCACTAACGAAGTCATGAAAGATGGATGGTTCCATACAGGAGATATAGGTGAGATTCTTCCAAACGGAGTACTCAGGATCATCGACCGTAAGAAGAATCTGATTAAACTCTCTCAAGGAGAATATGTTGCTCTCGAGCATCTGGAAAGCATCTACGGACAAAACCCTTTTGTCAAAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTAGTCGCCGTGATTGTTCCAAATCAAGAAACCGTGAACAGGTGGGCTAAGGGATTCGGCTATACTAAACCATTTGAAGAACTATGTTCTCTCTCGGAGCTACAAGAGCACATCCTCTTAGAACTGAAGTCCACGGCAGAAAAGAACATGCTAAGCAAGTTTGAGTACATTAAAGCGGTGACGATGGAGACAAAACCTTTCGACATCGAGAGAGGCCTAGTGACTGCGACGCTCAAGAACCAGAGGAAAAATCTTCTCAAGTTCTATCAGGTAGAAATCGAAGAAATGTACCGAAAATTGGCGTCAAAGAGGAGCTAA
Protein:  
MKSFAAKVEDGVKGEDGRPSVGPVYRNLLSEKGFPPRHSDITTTWDIFSKSVDKFPNNKMLGWRPIADEKVGPYIWKTYKEVYEEVLQIGSALRAAGAEPGCRVGIYGANCPQWIIAMEACAAHALISVPLYDTLGAGAVDYIVNHAEIDFVFVQNTKIKRLFEPDCTSANRLKAVVSFTNVSEEHSHKASEIGVKAYSWLDFLLMGREKPEETNPPKPSNVCTIMYTSGTSGEPKGVVLTHEAAATCVIGIDLCMDQFEDKMTPDDVYISFLPLAHILDRANEEYFFRNGASVGYYHGDLNALHDDIQELKPTFIAGVPRVFERIYEGIQKALQELNPRRRLIFYALYKYKLAWMNRGYSHSKASPMADFLAFRKIRKQLGGRLRLLVSGGAPLSPEIEEFLRVTSCCFVIQGYGLTETLGGTTLGYPDEMCMLGTVGIPAVYNEIRLEEVPEMGYDPLGENPAGEICIRGKCLFSGYYKNPELTNEVMKDGWFHTGDIGEILPNGVLRIIDRKKNLIKLSQGEYVALEHLESIYGQNPFVKDIWVYGDSFKSMLVAVIVPNQETVNRWAKGFGYTKPFEELCSLSELQEHILLELKSTAEKNMLSKFEYIKAVTMETKPFDIERGLVTATLKNQRKNLLKFYQVEIEEMYRKLASKRS